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Publications

Hepatology (Baltimore, Md.). 2016-11-01; 64.5: 1547-1558.
Shared genetic effects between hepatic steatosis and fibrosis: A prospective twin study
Cui J, Chen CH, Lo MT, Schork N, Bettencourt R, Gonzalez MP, Bhatt A, Hooker J, Shaffer K, Nelson KE, Long MT, Brenner DA, Sirlin CB, Loomba R, For The Genetics Of Nafld In Twins Consortium
PMID: 27315352
Molecular microbiology. 2016-11-01; 102.4: 628-641.
A role for copper in protozoan grazing - two billion years selecting for bacterial copper resistance
Hao X, Lüthje F, Rønn R, German NA, Li X, Huang F, Kisaka J, Huffman D, Alwathnani HA, Zhu YG, Rensing C
PMID: 27528008
Proceedings of the National Academy of Sciences of the United States of America. 2016-10-18; 113.42: 11901-11906.
Deep sequencing of 10,000 human genomes
Telenti A, Pierce LC, Biggs WH, di Iulio J, Wong EH, Fabani MM, Kirkness EF, Moustafa A, Shah N, Xie C, Brewerton SC, Bulsara N, Garner C, Metzker G, Sandoval E, Perkins BA, Och FJ, Turpaz Y, Venter JC
PMID: 27702888
BMC medical genomics. 2016-10-13; 9.1: 63.
Protecting genomic data analytics in the cloud: state of the art and opportunities
Tang H, Jiang X, Wang X, Wang S, Sofia H, Fox D, Lauter K, Malin B, Telenti A, Xiong L, Ohno-Machado L
PMID: 27733153
mBio. 2016-10-11; 7.5:
Genetic Dissection of the Type VI Secretion System in Acinetobacter and Identification of a Novel Peptidoglycan Hydrolase, TagX, Required for Its Biogenesis
Weber BS, Hennon SW, Wright MS, Scott NE, de Berardinis V, Foster LJ, Ayala JA, Adams MD, Feldman MF
PMID: 27729508
BMC bioinformatics. 2016-10-06; 17.Suppl 13: 333.
VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements
Toby IT, Levin MK, Salinas EA, Christley S, Bhattacharya S, Breden F, Buntzman A, Corrie B, Fonner J, Gupta NT, Hershberg U, Marthandan N, Rosenfeld A, Rounds W, Rubelt F, Scarborough W, Scott JK, Uduman M, Vander Heiden JA, Scheuermann RH, Monson N, Kleinstein SH, Cowell LG
PMID: 27766961
Human molecular genetics. 2016-10-01; 25.19: R182-R189.
Mission critical: the need for proteomics in the era of next-generation sequencing and precision medicine
Cayer DM, Nazor KL, Schork NJ
PMID: 27439388
Journal of virology. 2016-10-01; 90.19: 8454-63.
Reversion of Cold-Adapted Live Attenuated Influenza Vaccine into a Pathogenic Virus
Zhou B, Meliopoulos VA, Wang W, Lin X, Stucker KM, Halpin RA, Stockwell TB, Schultz-Cherry S, Wentworth DE
PMID: 27440882
Human molecular genetics. 2016-10-01; 25.19: 4350-4368.
Fine-mapping, novel loci identification, and SNP association transferability in a genome-wide association study of QRS duration in African Americans
Evans DS, Avery CL, Nalls MA, Li G, Barnard J, Smith EN, Tanaka T, Butler AM, Buxbaum SG, Alonso A, Arking DE, Berenson GS, Bis JC, Buyske S, Carty CL, Chen W, Chung MK, Cummings SR, Deo R, Eaton CB, Fox ER, Heckbert SR, Heiss G, Hindorff LA, Hsueh WC, Isaacs A, Jamshidi Y, Kerr KF, Liu F, Liu Y, Lohman KK, Magnani JW, Maher JF, Mehra R, Meng YA, Musani SK, Newton-Cheh C, North KE, Psaty BM, Redline S, Rotter JI, Schnabel RB, Schork NJ, Shohet RV, Singleton AB, Smith JD, Soliman EZ, Srinivasan SR, Taylor HA, Van Wagoner DR, Wilson JG, Young T, Zhang ZM, Zonderman AB, Evans MK, Ferrucci L, Murray SS, Tranah GJ, Whitsel EA, Reiner AP, CHARGE QRS Consortium, Sotoodehnia N
PMID: 27577874
Nucleic acids research. 2016-09-30; 44.17: 8501-11.
Impact of donor-recipient phylogenetic distance on bacterial genome transplantation
Labroussaa F, Lebaudy A, Baby V, Gourgues G, Matteau D, Vashee S, Sirand-Pugnet P, Rodrigue S, Lartigue C
PMID: 27488189