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Publications

Journal of theoretical biology. 2004-09-07; 230.1: 133-44.
Computational prediction of conserved operons and phylogenetic footprinting of transcription regulatory elements in the metal-reducing bacterial family Geobacteraceae
Yan B, Methé BA, Lovley DR, Krushkal J
PMID: 15276006
Frontiers in bioscience : a journal and virtual library. 2004-09-01; 9.2347-72.
Mechanisms of HTLV-1 transformation
Kehn K, Berro R, de la Fuente C, Strouss K, Ghedin E, Dadgar S, Bottazzi ME, Pumfery A, Kashanchi F
PMID: 15353292
Briefings in bioinformatics. 2004-09-01; 5.3: 237-48.
Comparative genome assembly
Pop M, Phillippy A, Delcher AL, Salzberg SL
PMID: 15383210
Genetics. 2004-09-01; 168.1: 21-33.
Analysis of Deinococcus radiodurans's transcriptional response to ionizing radiation and desiccation reveals novel proteins that contribute to extreme radioresistance
Tanaka M, Earl AM, Howell HA, Park MJ, Eisen JA, Peterson SN, Battista JR
PMID: 15454524
Frontiers in bioscience : a journal and virtual library. 2004-09-01; 9.2388-413.
Role of viral regulatory and accessory proteins in HIV-1 replication
Seelamgari A, Maddukuri A, Berro R, de la Fuente C, Kehn K, Deng L, Dadgar S, Bottazzi ME, Ghedin E, Pumfery A, Kashanchi F
PMID: 15353294
PLoS biology. 2004-09-01; 2.9: E285.
The genome Assembly Archive: a new public resource
Salzberg SL, Church D, DiCuccio M, Yaschenko E, Ostell J
PMID: 15367931
Molecular ecology. 2004-09-01; 13.9: 2721-34.
Geographic variation in Mexican jays (Aphelocoma ultramarina): local differentiation, polyphyly or hybridization?
Bhagabati NK, Brown JL, Bowen BS
PMID: 15315684
PLoS biology. 2004-09-01; 2.9: E317.
Submission of microarray data to public repositories
Ball CA, Brazma A, Causton H, Chervitz S, Edgar R, Hingamp P, Matese JC, Parkinson H, Quackenbush J, Ringwald M, Sansone SA, Sherlock G, Spellman P, Stoeckert C, Tateno Y, Taylor R, White J, Winegarden N
PMID: 15340489
The journals of gerontology. Series A, Biological sciences and medical sciences. 2004-09-01; 59.9: B873-5.
Zebrafish, killifish, neither fish, both fish?
Gerhard GS, Malek RL, Keller E, Murtha J, Cheng KC
PMID: 15472148
Trends in microbiology. 2004-09-01; 12.9: 404-5.
Exploring the boundaries of life
Fraser CM
PMID: 15337160