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Publications

Genome biology. 2005-01-01; 6.1: 212.
New evolutionary frontiers from unusual virus genomes
Desjardins C, Eisen JA, Nene V
PMID: 15774035
PLoS biology. 2005-01-01; 3.1: e13.
Sorghum genome sequencing by methylation filtration
Bedell JA, Budiman MA, Nunberg A, Citek RW, Robbins D, Jones J, Flick E, Rholfing T, Fries J, Bradford K, McMenamy J, Smith M, Holeman H, Roe BA, Wiley G, Korf IF, Rabinowicz PD, Lakey N, McCombie WR, Jeddeloh JA, Martienssen RA
PMID: 15660154
Annual review of medicine. 2005-01-01; 56.459-74.
Application of microbial genomic science to advanced therapeutics
Fraser CM, Rappuoli R
PMID: 15660522
Nucleic acids research. 2005-01-01; 33.Database issue: D334-7.
EcoCyc: a comprehensive database resource for Escherichia coli
Keseler IM, Collado-Vides J, Gama-Castro S, Ingraham J, Paley S, Paulsen IT, Peralta-Gil M, Karp PD
PMID: 15608210
Nucleic acids research. 2005-01-01; 33.Database issue: 2980-92.
Composite genome map and recombination parameters derived from three archetypal lineages of Toxoplasma gondii
Khan A, Taylor S, Su C, Mackey AJ, Boyle J, Cole R, Glover D, Tang K, Paulsen IT, Berriman M, Boothroyd JC, Pfefferkorn ER, Dubey JP, Ajioka JW, Roos DS, Wootton JC, Sibley LD
PMID: 15911631
Nucleic acids research. 2005-01-01; 33.Database issue: D71-4.
The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes
Lee Y, Tsai J, Sunkara S, Karamycheva S, Pertea G, Sultana R, Antonescu V, Chan A, Cheung F, Quackenbush J
PMID: 15608288
Nucleic acids research. 2005-01-01; 33.Database issue: 6688-93.
The genetic map and comparative analysis with the physical map of Trypanosoma brucei
Macleod A, Tweedie A, McLellan S, Taylor S, Hall N, Berriman M, El-Sayed NM, Hope M, Turner CM, Tait A
PMID: 16314301
Genome biology. 2005-01-01; 6.1: 347.
Microbial metagenomics
Mongodin EF, Emerson JB, Nelson KE
PMID: 16207365
Nucleic acids research. 2005-01-01; 33.Database issue: D201-5.
InterPro, progress and status in 2005
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bradley P, Bork P, Bucher P, Cerutti L, Copley R, Courcelle E, Das U, Durbin R, Fleischmann W, Gough J, Haft D, Harte N, Hulo N, Kahn D, Kanapin A, Krestyaninova M, Lonsdale D, Lopez R, Letunic I, Madera M, Maslen J, McDowall J, Mitchell A, Nikolskaya AN, Orchard S, Pagni M, Ponting CP, Quevillon E, Selengut J, Sigrist CJ, Silventoinen V, Studholme DJ, Vaughan R, Wu CH
PMID: 15608177
Journal of bacteriology. 2005-01-01; 187.1: 366-75.
Identification of a Dichelobacter nodosus ferric uptake regulator and determination of its regulatory targets
Parker D, Kennan RM, Myers GS, Paulsen IT, Rood JI
PMID: 15601721