Publications

Science (New York, N.Y.). 2007-02-23; 315.5815: 1126-30.

Quantitative phylogenetic assessment of microbial communities in diverse environments

von Mering C, Hugenholtz P, Raes J, Tringe SG, Doerks T, Jensen LJ, Ward N, Bork P

PMID: 17272687

Proceedings of the National Academy of Sciences of the United States of America. 2007-02-20; 104.8: 2767-72.

Phylogenomics of nonavian reptiles and the structure of the ancestral amniote genome

Shedlock AM, Botka CW, Zhao S, Shetty J, Zhang T, Liu JS, Deschavanne PJ, Edwards SV

PMID: 17307883

Virology. 2007-02-20; 358.2: 424-35.

Complete genomic sequences, a key residue in the spike protein and deletions in nonstructural protein 3b of US strains of the virulent and attenuated coronaviruses, transmissible gastroenteritis virus and porcine respiratory coronavirus

Zhang X, Hasoksuz M, Spiro D, Halpin R, Wang S, Stollar S, Janies D, Hadya N, Tang Y, Ghedin E, Saif L

PMID: 17023013

Virology. 2007-02-20; 358.2: 472-84.

Sequence and annotation of the 369-kb NY-2A and the 345-kb AR158 viruses that infect Chlorella NC64A

Fitzgerald LA, Graves MV, Li X, Feldblyum T, Nierman WC, Van Etten JL

PMID: 17027058

Science (New York, N.Y.). 2007-02-16; 315.5814: 998-1000.

The Calyptogena magnifica chemoautotrophic symbiont genome

Newton IL, Woyke T, Auchtung TA, Dilly GF, Dutton RJ, Fisher MC, Fontanez KM, Lau E, Stewart FJ, Richardson PM, Barry KW, Saunders E, Detter JC, Wu D, Eisen JA, Cavanaugh CM

PMID: 17303757

Bioinformatics (Oxford, England). 2007-02-15; 23.4: 500-1.

Assembling millions of short DNA sequences using SSAKE

Warren RL, Sutton GG, Jones SJ, Holt RA

PMID: 17158514

Veterinary immunology and immunopathology. 2007-02-15; 115.3-4: 383-9.

Immunostimulatory CpG oligodeoxynucleotides enhance the induction of bovine CD4+ cytotoxic T-lymphocyte responses against the polymorphic immunodominant molecule of the protozoan parasite Theileria parva

Graham SP, Saya R, Awino E, Ngugi D, Nyanjui JK, Hecker R, Taracha EL, Nene V

PMID: 17197038

Immunome research. 2007-02-09; 3.2.

A novel strategy for the identification of antigens that are recognised by bovine MHC class I restricted cytotoxic T cells in a protozoan infection using reverse vaccinology

Graham SP, Honda Y, Pell茅 R, Mwangi DM, Glew EJ, de Villiers EP, Shah T, Bishop R, van der Bruggen P, Nene V, Taracha EL

PMID: 17291333

Molecular microbiology. 2007-02-01; 63.4: 995-1007.

Smooth to rugose phase variation in Vibrio cholerae can be mediated by a single nucleotide change that targets c-di-GMP signalling pathway

Beyhan S, Yildiz FH

PMID: 17233827

Journal of bacteriology. 2007-02-01; 189.3: 717-29.

Regulation of Vibrio polysaccharide synthesis and virulence factor production by CdgC, a GGDEF-EAL domain protein, in Vibrio cholerae

Lim B, Beyhan S, Yildiz FH

PMID: 17122338

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