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Publications

Nucleic acids research. 2010-01-01; 38.Database issue: D331-5.
The Gene Ontology in 2010: extensions and refinements
Berardini TZ, Li D, Huala E, Bridges S, Burgess S, McCarthy F, Carbon S, Lewis SE, Mungall CJ, Abdulla A, Wood V, Feltrin E, Valle G, Chisholm RL, Fey P, Gaudet P, Kibbe W, Basu S, Bushmanova Y, Eilbeck K, Siegele DA, McIntosh B, Renfro D, Zweifel A, Hu JC, Ashburner M, Tweedie S, Alam-Faruque Y, Apweiler R, Auchinchloss A, Bairoch A, Barrell D, Binns D, Blatter MC, Bougueleret L, Boutet E, Breuza L, Bridge A, Browne P, Chan WM, Coudert E, Daugherty L, Dimmer E, Eberhardt R, Estreicher A, Famiglietti L, Ferro-Rojas S, Feuermann M, Foulger R, Gruaz-Gumowski N, Hinz U, Huntley R, Jimenez S, Jungo F, Keller G, Laiho K, Legge D, Lemercier P, Lieberherr D, Magrane M, O'Donovan C, Pedruzzi I, Poux S, Rivoire C, Roechert B, Sawford T, Schneider M, Stanley E, Stutz A, Sundaram S, Tognolli M, Xenarios I, Harris MA, Deegan JI, Ireland A, Lomax J, Jaiswal P, Chibucos M, Giglio MG, Wortman J, Hannick L, Madupu R, Botstein D, Dolinski K, Livstone MS, Oughtred R, Blake JA, Bult C, Diehl AD, Dolan M, Drabkin H, Eppig JT, Hill DP, Ni L, Ringwald M, Sitnikov D, Collmer C, Torto-Alalibo T, Laulederkind S, Shimoyama M, Twigger S, D'Eustachio P, Matthews L, Balakrishnan R, Binkley G, Cherry JM, Christie KR, Costanzo MC, Engel SR, Fisk DG, Hirschman JE, Hitz BC, Hong EL, Krieger CJ, Miyasato SR, Nash RS, Park J, Skrzypek MS, Weng S, Wong ED, Aslett M, Chan J, Kishore R, Sternberg P, Van Auke K, Khodiyar VK, Lovering RC, Talmud PJ, Howe D, Westerfield M
PMID: 19920128
BMC genomics. 2009-12-22; 10.624.
Potential impact of stress activated retrotransposons on genome evolution in a marine diatom
Maumus F, Allen AE, Mhiri C, Hu H, Jabbari K, Vardi A, Grandbastien MA, Bowler C
PMID: 20028555
BMC genetics. 2009-12-18; 10.85.
Assessing the utility of whole-genome amplified serum DNA for array-based high throughput genotyping
Bucasas KL, Pandya GA, Pradhan S, Fleischmann RD, Peterson SN, Belmont JW
PMID: 20021669
Environmental science & technology. 2009-12-15; 43.24: 9519-24.
Selecting anode-respiring bacteria based on anode potential: phylogenetic, electrochemical, and microscopic characterization
Torres CI, Krajmalnik-Brown R, Parameswaran P, Marcus AK, Wanger G, Gorby YA, Rittmann BE
PMID: 20000550
Translational oncology. 2009-12-01; 2.4: 341-9.
Expression profiling of the ovarian surface kinome reveals candidate genes for early neoplastic changes
Pejovic T, Pande NT, Mori M, Mhawech-Fauceglia P, Harrington C, Mongoue-Tchokote S, Dim D, Andrews C, Beck A, Tarumi Y, Djilas J, Cappuccini F, Caballero O, Huang J, Levy S, Tsiamouri A, Cain J, Bagby GC, Strausberg RL, Simpson AJ, Odunsi KO
PMID: 19956396
Proteomics. 2009-12-01; 9.23: 5296-302.
Benchmarking yeast two-hybrid systems using the interactions of bacterial motility proteins
Rajagopala SV, Hughes KT, Uetz P
PMID: 19834901
PLoS genetics. 2009-12-01; 5.12: e1000786.
Comparative ICE genomics: insights into the evolution of the SXT/R391 family of ICEs
Wozniak RA, Fouts DE, Spagnoletti M, Colombo MM, Ceccarelli D, Garriss G, Déry C, Burrus V, Waldor MK
PMID: 20041216
Environmental microbiology reports. 2009-12-01; 1.6: 555-62.
Novel diversity of bacterial communities associated with bottlenose dolphin upper respiratory tracts
Johnson WR, Torralba M, Fair PA, Bossart GD, Nelson KE, Morris PJ
PMID: 23765934
Applied and environmental microbiology. 2009-12-01; 75.23: 7445-52.
Endosymbiotic bacteria in the parasitic ciliate Ichthyophthirius multifiliis
Sun HY, Noe J, Barber J, Coyne RS, Cassidy-Hanley D, Clark TG, Findly RC, Dickerson HW
PMID: 19820157
Journal of bacteriology. 2009-12-01; 191.24: 7628-9.
Draft genome sequences of Yersinia pestis isolates from natural foci of endemic plague in China
Eppinger M, Guo Z, Sebastian Y, Song Y, Lindler LE, Yang R, Ravel J
PMID: 19820101