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Publications

Journal of bacteriology. 2012-04-01; 194.8: 2121-2.
Genome sequence of "Candidatus Nitrosopumilus salaria" BD31, an ammonia-oxidizing archaeon from the San Francisco Bay estuary
Mosier AC, Allen EE, Kim M, Ferriera S, Francis CA
PMID: 22461555
Journal of bacteriology. 2012-04-01; 194.8: 2119-20.
Genome sequence of "Candidatus Nitrosoarchaeum limnia" BG20, a low-salinity ammonia-oxidizing archaeon from the San Francisco Bay estuary
Mosier AC, Allen EE, Kim M, Ferriera S, Francis CA
PMID: 22461554
BMC bioinformatics. 2012-03-19; 13.42.
Cloud BioLinux: pre-configured and on-demand bioinformatics computing for the genomics community
Krampis K, Booth T, Chapman B, Tiwari B, Bicak M, Field D, Nelson KE
PMID: 22429538
Bioinformatics (Oxford, England). 2012-03-01; 28.5: 726-8.
nEASE: a method for gene ontology subclassification of high-throughput gene expression data
Chittenden TW, Howe EA, Taylor JM, Mar JC, Aryee MJ, Gómez H, Sultana R, Braisted J, Nair SJ, Quackenbush J, Holmes C
PMID: 22247278
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012-03-01; 124.4: 685-95.
Identification, validation and high-throughput genotyping of transcribed gene SNPs in cassava
Ferguson ME, Hearne SJ, Close TJ, Wanamaker S, Moskal WA, Town CD, de Young J, Marri PR, Rabbi IY, de Villiers EP
PMID: 22069119
Influenza and other respiratory viruses. 2012-03-01; 6.2: 142-52, e1-5.
Improving influenza vaccine virus selection: report of a WHO informal consultation held at WHO headquarters, Geneva, Switzerland, 14-16 June 2010
Ampofo WK, Bachtiar NS, Bakamutumaho B, Barr I, Baylor N, Bedford T, Bernat J, Blayer S, Bourrier M, Boye CS, Bresee J, Broberg E, Brytting M, Bucher D, Cassels FJ, Cebedzic R, Chadha M, Chittakanpitch M, Cobey S, Colegate T, Costa JA, Cox NJ, Daves S, Do MH, Diep Ldo T, Edwards S, Eichelberger M, El Aouad R, El Kholy N, Engelhardt O, Fathalla F, Ferguson N, Franks J, Giovanni MY, Gog J, Grohmann G, Gupta S, Hachid A, Hay A, Heraud JM, Hidayati N, Howard K, Huang S, Hungnes O, Jernigan D, Kadjo H, Kang C, Katz J, Kelso A, Kiselev OI, Kistner O, Kullabutr K, Lambert L, Le M, Leung-Tack P, Levandowski R, Li Y, Lim W, Locher OK, López-Martínez I, Louwerens J, Maharani, McCauley J, Mefed K, Miller JD, Mishra AC, Mokhtari-Azad T, Monto A, Nelson K, Nelson M, Neumeier E, Njouom R, Ochieng WO, Odagiri T, Paiva TM, Pechirra P, Poon L, Prosenc K, Rambaut A, Riayati EE, Rimmelzwaan G, Russell C, Salisbury D, Sampurno OD, Savy V, Schoofs P, Schweiger B, Selleck P, Shaw M, Shay D, Sheibani A, Siqueira M, Slim A, Smith D, Spiro D, Stevens J, Sturm-Ramirez KM, Tada Y, Takizawa K, Tashiro M, Taylor B, Thomas Y, Van der Werf S, Waddell AL, Wang D, Webby R, Weber S, Weir JP, Win N, Wood J, Wu A, Zahoor Zaidi SS, Zambon M
PMID: 21819547
Proceedings of the National Academy of Sciences of the United States of America. 2012-02-07; 109.6: E317-25.
Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability
Marchetti A, Schruth DM, Durkin CA, Parker MS, Kodner RB, Berthiaume CT, Morales R, Allen AE, Armbrust EV
PMID: 22308424
Parasite immunology. 2012-02-01; 34.2-3: 121-9.
Filarial and Wolbachia genomics
Scott AL, Ghedin E, Nutman TB, McReynolds LA, Poole CB, Slatko BE, Foster JM
PMID: 22098559
Environmental microbiology. 2012-02-01; 14.2: 387-404.
Massive dominance of Epsilonproteobacteria in formation waters from a Canadian oil sands reservoir containing severely biodegraded oil
Hubert CR, Oldenburg TB, Fustic M, Gray ND, Larter SR, Penn K, Rowan AK, Seshadri R, Sherry A, Swainsbury R, Voordouw G, Voordouw JK, Head IM
PMID: 21824242
ACS synthetic biology. 2012-01-20; 1.1: 22-8.
Cloning the Acholeplasma laidlawii PG-8A genome in Saccharomyces cerevisiae as a yeast centromeric plasmid
Karas BJ, Tagwerker C, Yonemoto IT, Hutchison CA, Smith HO
PMID: 23651007