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Publications

Microbiome. 2015-12-15; 3.74.
The administration of intranasal live attenuated influenza vaccine induces changes in the nasal microbiota and nasal epithelium gene expression profiles
Tarabichi Y, Li K, Hu S, Nguyen C, Wang X, Elashoff D, Saira K, Frank B, Bihan M, Ghedin E, Methé BA, Deng JC
PMID: 26667497
Applied and environmental microbiology. 2015-12-01; 81.24: 8265-76.
Single cells within the Puerto Rico trench suggest hadal adaptation of microbial lineages
León-Zayas R, Novotny M, Podell S, Shepard CM, Berkenpas E, Nikolenko S, Pevzner P, Lasken RS, Bartlett DH
PMID: 26386059
Environmental microbiology. 2015-12-01; 17.12: 5100-8.
Closing the gaps on the viral photosystem-I psaDCAB gene organization
Roitman S, Flores-Uribe J, Philosof A, Knowles B, Rohwer F, Ignacio-Espinoza JC, Sullivan MB, Cornejo-Castillo FM, Sánchez P, Acinas SG, Dupont CL, Béjà O
PMID: 26310718
PLoS computational biology. 2015-12-01; 11.12: e1004647.
The Characteristics of Heterozygous Protein Truncating Variants in the Human Genome
Bartha I, Rausell A, McLaren PJ, Mohammadi P, Tardaguila M, Chaturvedi N, Fellay J, Telenti A
PMID: 26642228
Eukaryotic cell. 2015-12-01; 14.12: 1240-52.
Depletion of UBC9 Causes Nuclear Defects during the Vegetative and Sexual Life Cycles in Tetrahymena thermophila
Yang Q, Nasir AM, Coyne RS, Forney JD
PMID: 26453653
The ISME journal. 2015-12-01; 9.12: 2605-19.
Meta-omics uncover temporal regulation of pathways across oral microbiome genera during in vitro sugar metabolism
Edlund A, Yang Y, Yooseph S, Hall AP, Nguyen DD, Dorrestein PC, Nelson KE, He X, Lux R, Shi W, McLean JS
PMID: 26023872
Journal of virology. 2015-12-01; 89.23: 11935-44.
Differential Susceptibilities of Human Lung Primary Cells to H1N1 Influenza Viruses
Travanty E, Zhou B, Zhang H, Di YP, Alcorn JF, Wentworth DE, Mason R, Wang J
PMID: 26378172
Gastroenterology. 2015-12-01; 149.7: 1784-93.
Heritability of Hepatic Fibrosis and Steatosis Based on a Prospective Twin Study
Loomba R, Schork N, Chen CH, Bettencourt R, Bhatt A, Ang B, Nguyen P, Hernandez C, Richards L, Salotti J, Lin S, Seki E, Nelson KE, Sirlin CB, Brenner D, Genetics of NAFLD in Twins Consortium
PMID: 26299412
Proceedings of the National Academy of Sciences of the United States of America. 2015-11-24; 112.47: 14658-63.
Polymorphisms of large effect explain the majority of the host genetic contribution to variation of HIV-1 virus load
McLaren PJ, Coulonges C, Bartha I, Lenz TL, Deutsch AJ, Bashirova A, Buchbinder S, Carrington MN, Cossarizza A, Dalmau J, De Luca A, Goedert JJ, Gurdasani D, Haas DW, Herbeck JT, Johnson EO, Kirk GD, Lambotte O, Luo M, Mallal S, van Manen D, Martinez-Picado J, Meyer L, Miro JM, Mullins JI, Obel N, Poli G, Sandhu MS, Schuitemaker H, Shea PR, Theodorou I, Walker BD, Weintrob AC, Winkler CA, Wolinsky SM, Raychaudhuri S, Goldstein DB, Telenti A, de Bakker PI, Zagury JF, Fellay J
PMID: 26553974