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Publications

Nucleic acids research. 2002-01-01; 30.1: 56-8.
The EcoCyc Database
Karp PD, Riley M, Saier M, Paulsen IT, Collado-Vides J, Paley SM, Pellegrini-Toole A, Bonavides C, Gama-Castro S
PMID: 11752253
Bioinformatics (Oxford, England). 2002-01-01; 18.1: 207-8.
Genesis: cluster analysis of microarray data
Sturn A, Quackenbush J, Trajanoski Z
PMID: 11836235
Advances in applied microbiology. 2002-01-01; 51.201-45.
Genomics for applied microbiology
Nierman WC, Nelson KE
PMID: 12236059
Genome biology. 2002-01-01; 3.6: RESEARCH0029.
Full-length messenger RNA sequences greatly improve genome annotation
Haas BJ, Volfovsky N, Town CD, Troukhan M, Alexandrov N, Feldmann KA, Flavell RB, White O, Salzberg SL
PMID: 12093376
Journal of molecular microbiology and biotechnology. 2002-01-01; 4.1: 37-67.
Transport capabilities encoded within the Bacillus subtilis genome
Saier MH, Goldman SR, Maile RR, Moreno MS, Weyler W, Yang N, Paulsen IT
PMID: 11763970
Microbiology (Reading, England). 2002-01-01; 148.Pt 1: 123-31.
Regulation of carbon utilization by sulfur availability in Escherichia coli and Salmonella typhimurium
Quan JA, Schneider BL, Paulsen IT, Yamada M, Kredich NM, Saier MH
PMID: 11782505
Plant molecular biology. 2002-01-01; 48.1-2: 39-48.
Computational gene finding in plants
Pertea M, Salzberg SL
PMID: 11860211
Science (New York, N.Y.). 2001-12-14; 294.5550: 2317-23.
The genome of the natural genetic engineer Agrobacterium tumefaciens C58
Wood DW, Setubal JC, Kaul R, Monks DE, Kitajima JP, Okura VK, Zhou Y, Chen L, Wood GE, Almeida NF, Woo L, Chen Y, Paulsen IT, Eisen JA, Karp PD, Bovee D, Chapman P, Clendenning J, Deatherage G, Gillet W, Grant C, Kutyavin T, Levy R, Li MJ, McClelland E, Palmieri A, Raymond C, Rouse G, Saenphimmachak C, Wu Z, Romero P, Gordon D, Zhang S, Yoo H, Tao Y, Biddle P, Jung M, Krespan W, Perry M, Gordon-Kamm B, Liao L, Kim S, Hendrick C, Zhao ZY, Dolan M, Chumley F, Tingey SV, Tomb JF, Gordon MP, Olson MV, Nester EW
PMID: 11743193
Bioinformatics (Oxford, England). 2001-12-01; 17.12: 1123-30.
A probabilistic method for identifying start codons in bacterial genomes
Suzek BE, Ermolaeva MD, Schreiber M, Salzberg SL
PMID: 11751220
Genome research. 2001-12-01; 11.12: 2133-41.
Toward a cytological characterization of the rice genome
Cheng Z, Buell CR, Wing RA, Gu M, Jiang J
PMID: 11731505