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Publications

Nucleic acids research. 2004-01-01; 32.Database issue: D258-61.
The Gene Ontology (GO) database and informatics resource
Harris MA, Clark J, Ireland A, Lomax J, Ashburner M, Foulger R, Eilbeck K, Lewis S, Marshall B, Mungall C, Richter J, Rubin GM, Blake JA, Bult C, Dolan M, Drabkin H, Eppig JT, Hill DP, Ni L, Ringwald M, Balakrishnan R, Cherry JM, Christie KR, Costanzo MC, Dwight SS, Engel S, Fisk DG, Hirschman JE, Hong EL, Nash RS, Sethuraman A, Theesfeld CL, Botstein D, Dolinski K, Feierbach B, Berardini T, Mundodi S, Rhee SY, Apweiler R, Barrell D, Camon E, Dimmer E, Lee V, Chisholm R, Gaudet P, Kibbe W, Kishore R, Schwarz EM, Sternberg P, Gwinn M, Hannick L, Wortman J, Berriman M, Wood V, de la Cruz N, Tonellato P, Jaiswal P, Seigfried T, White R, Gene Ontology Consortium
PMID: 14681407
Methods in molecular biology (Clifton, N.J.). 2004-01-01; 270.279-94.
Using the TIGR assembler in shotgun sequencing projects
Pop M, Kosack D
PMID: 15020832
Methods in molecular biology (Clifton, N.J.). 2004-01-01; 270.1-6.
Use of BAC end sequences for SNP discovery
Weil MM, Pershad R, Wang R, Zhao S
PMID: 15024155
Genome biology. 2004-01-01; 5.2: R34.
Orthologous gene-expression profiling in multi-species models: search for candidate genes
Grigoryev DN, Ma SF, Irizarry RA, Ye SQ, Quackenbush J, Garcia JG
PMID: 15128448
Nucleic acids research. 2004-01-01; 32.Database issue: D360-3.
The TIGR Plant Repeat Databases: a collective resource for the identification of repetitive sequences in plants
Ouyang S, Buell CR
PMID: 14681434
Genome research. 2004-01-01; 14.1: 149-59.
Hierarchical scaffolding with Bambus
Pop M, Kosack DS, Salzberg SL
PMID: 14707177
Genome research. 2004-01-01; 14.1: 179-87.
1-Mb resolution array-based comparative genomic hybridization using a BAC clone set optimized for cancer gene analysis
Greshock J, Naylor TL, Margolin A, Diskin S, Cleaver SH, Futreal PA, DeJong PJ, Zhao S, Liebman M, Weber BL
PMID: 14672980
Journal of bacteriology. 2004-01-01; 186.1: 136-45.
Ruminococcus albus 8 mutants defective in cellulose degradation are deficient in two processive endocellulases, Cel48A and Cel9B, both of which possess a novel modular architecture
Devillard E, Goodheart DB, Karnati SK, Bayer EA, Lamed R, Miron J, Nelson KE, Morrison M
PMID: 14679233
Nucleic acids research. 2004-01-01; 32.Database issue: D284-8.
TransportDB: a relational database of cellular membrane transport systems
Ren Q, Kang KH, Paulsen IT
PMID: 14681414
Molecular and biochemical parasitology. 2004-01-01; 133.1: 27-35.
Chloroquine resistance in Plasmodium chabaudi: are chloroquine-resistance transporter (crt) and multi-drug resistance (mdr1) orthologues involved?
Hunt P, Cravo PV, Donleavy P, Carlton JM, Walliker D
PMID: 14668009