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Publications

BMC bioinformatics. 2006-01-19; 7.31.
Similarity-based gene detection: using COGs to find evolutionarily-conserved ORFs
Powell BC, Hutchison CA
PMID: 16423288
Gene. 2006-01-17; 366.1: 104-8.
Using the transcriptome to annotate the genome revisited: application of massively parallel signature sequencing (MPSS)
Shah T, de Villiers E, Nene V, Hass B, Taracha E, Gardner MJ, Sansom C, Pelle R, Bishop R
PMID: 16303258
Proceedings of the National Academy of Sciences of the United States of America. 2006-01-17; 103.3: 732-7.
Molecular analysis of the bacterial microbiota in the human stomach
Bik EM, Eckburg PB, Gill SR, Nelson KE, Purdom EA, Francois F, Perez-Perez G, Blaser MJ, Relman DA
PMID: 16407106
Science (New York, N.Y.). 2006-01-13; 311.5758: 239-42.
Herpesviral protein networks and their interaction with the human proteome
Uetz P, Dong YA, Zeretzke C, Atzler C, Baiker A, Berger B, Rajagopala SV, Roupelieva M, Rose D, Fossum E, Haas J
PMID: 16339411
Proceedings of the National Academy of Sciences of the United States of America. 2006-01-10; 103.2: 425-30.
Essential genes of a minimal bacterium
Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA, Smith HO, Venter JC
PMID: 16407165
Methods in enzymology. 2006-01-01; 411.134-93.
TM4 microarray software suite
Saeed AI, Bhagabati NK, Braisted JC, Liang W, Sharov V, Howe EA, Li J, Thiagarajan M, White JA, Quackenbush J
PMID: 16939790
Journal of bacteriology. 2006-01-01; 188.2: 759-72.
Global phylogeny of Mycobacterium tuberculosis based on single nucleotide polymorphism (SNP) analysis: insights into tuberculosis evolution, phylogenetic accuracy of other DNA fingerprinting systems, and recommendations for a minimal standard SNP set
Filliol I, Motiwala AS, Cavatore M, Qi W, Hazbón MH, Bobadilla del Valle M, Fyfe J, García-García L, Rastogi N, Sola C, Zozio T, Guerrero MI, León CI, Crabtree J, Angiuoli S, Eisenach KD, Durmaz R, Joloba ML, Rendón A, Sifuentes-Osornio J, Ponce de León A, Cave MD, Fleischmann R, Whittam TS, Alland D
PMID: 16385065
Current genetics. 2006-01-01; 49.1: 39-46.
Mitochondrial genome sequences and molecular evolution of the Irish potato famine pathogen, Phytophthora infestans
Avila-Adame C, Gómez-Alpizar L, Zismann V, Jones KM, Buell CR, Ristaino JB
PMID: 16328503
Nucleic acids research. 2006-01-01; 34.3: 955-67.
Transcriptional activators in yeast
Titz B, Thomas S, Rajagopala SV, Chiba T, Ito T, Uetz P
PMID: 16464826
Genome biology. 2006-01-01; 7.2: 223.
The elusive yeast interactome
Goll J, Uetz P
PMID: 16938899