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Publications

PloS one. 2010-12-31; 5.12: e15220.
Robust computational analysis of rRNA hypervariable tag datasets
Sipos M, Jeraldo P, Chia N, Qu A, Dhillon AS, Konkel ME, Nelson KE, White BA, Goldenfeld N
PMID: 21217830
BMC research notes. 2010-12-13; 3.334.
Quality control of the sheep bacterial artificial chromosome library, CHORI-243
Ratnakumar A, Kirkness EF, Dalrymple BP
PMID: 21144002
Journal of integrative plant biology. 2010-12-01; 52.12: 1059-74.
Monitoring the expression of maize genes in developing kernels under drought stress using oligo-microarray
Luo M, Liu J, Lee RD, Scully BT, Guo B
PMID: 21106005
Nature biotechnology. 2010-12-01; 28.12: 1272-3.
Megabases for kilodollars
Algire M, Krishnakumar R, Merryman C
PMID: 21139611
Biochemistry. 2010-11-30; 49.47: 10117-30.
A comparison of methanobactins from Methylosinus trichosporium OB3b and Methylocystis strain Sb2 predicts methanobactins are synthesized from diverse peptide precursors modified to create a common core for binding and reducing copper ions
Krentz BD, Mulheron HJ, Semrau JD, Dispirito AA, Bandow NL, Haft DH, Vuilleumier S, Murrell JC, McEllistrem MT, Hartsel SC, Gallagher WH
PMID: 20961038
Genome biology. 2010-11-25; 11.11: R114.
Systematic detection of putative tumor suppressor genes through the combined use of exome and transcriptome sequencing
Zhao Q, Kirkness EF, Caballero OL, Galante PA, Parmigiani RB, Edsall L, Kuan S, Ye Z, Levy S, Vasconcelos AT, Ren B, de Souza SJ, Camargo AA, Simpson AJ, Strausberg RL
PMID: 21108794
PloS one. 2010-11-19; 5.11: e14072.
Genome sequence of the deltaproteobacterial strain NaphS2 and analysis of differential gene expression during anaerobic growth on naphthalene
DiDonato RJ, Young ND, Butler JE, Chin KJ, Hixson KK, Mouser P, Lipton MS, Deboy R, Methé BA
PMID: 21124915
Proceedings of the National Academy of Sciences of the United States of America. 2010-11-16; 107.46: 20033-8.
Spliced leader-based metatranscriptomic analyses lead to recognition of hidden genomic features in dinoflagellates
Lin S, Zhang H, Zhuang Y, Tran B, Gill J
PMID: 21041634
PloS one. 2010-11-12; 5.11: e13963.
Characterization of the fecal microbiome from non-human wild primates reveals species specific microbial communities
Yildirim S, Yeoman CJ, Sipos M, Torralba M, Wilson BA, Goldberg TL, Stumpf RM, Leigh SR, White BA, Nelson KE
PMID: 21103066
Nature. 2010-11-04; 468.7320: 60-6.
Genomic and functional adaptation in surface ocean planktonic prokaryotes
Yooseph S, Nealson KH, Rusch DB, McCrow JP, Dupont CL, Kim M, Johnson J, Montgomery R, Ferriera S, Beeson K, Williamson SJ, Tovchigrechko A, Allen AE, Zeigler LA, Sutton G, Eisenstadt E, Rogers YH, Friedman R, Frazier M, Venter JC
PMID: 21048761