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Publications

Science (New York, N.Y.). 2011-02-04; 331.6017: 555-61.
The ecoresponsive genome of Daphnia pulex
Colbourne JK, Pfrender ME, Gilbert D, Thomas WK, Tucker A, Oakley TH, Tokishita S, Aerts A, Arnold GJ, Basu MK, Bauer DJ, Cáceres CE, Carmel L, Casola C, Choi JH, Detter JC, Dong Q, Dusheyko S, Eads BD, Fröhlich T, Geiler-Samerotte KA, Gerlach D, Hatcher P, Jogdeo S, Krijgsveld J, Kriventseva EV, Kültz D, Laforsch C, Lindquist E, Lopez J, Manak JR, Muller J, Pangilinan J, Patwardhan RP, Pitluck S, Pritham EJ, Rechtsteiner A, Rho M, Rogozin IB, Sakarya O, Salamov A, Schaack S, Shapiro H, Shiga Y, Skalitzky C, Smith Z, Souvorov A, Sung W, Tang Z, Tsuchiya D, Tu H, Vos H, Wang M, Wolf YI, Yamagata H, Yamada T, Ye Y, Shaw JR, Andrews J, Crease TJ, Tang H, Lucas SM, Robertson HM, Bork P, Koonin EV, Zdobnov EM, Grigoriev IV, Lynch M, Boore JL
PMID: 21292972
Infection and immunity. 2011-02-01; 79.2: 982-3.
Complete genome sequence of Mycoplasma bovis type strain PG45 (ATCC 25523)
Wise KS, Calcutt MJ, Foecking MF, Röske K, Madupu R, Methé BA
PMID: 21134966
Journal of biomedical informatics. 2011-02-01; 44.1: 3-7.
Ontologies for clinical and translational research: Introduction
Smith B, Scheuermann RH
PMID: 21241822
Applied and environmental microbiology. 2011-02-01; 77.4: 1512-5.
Novel antibacterial proteins from the microbial communities associated with the sponge Cymbastela concentrica and the green alga Ulva australis
Yung PY, Burke C, Lewis M, Kjelleberg S, Thomas T
PMID: 21183639
Molecular biology and evolution. 2011-02-01; 28.2: 1083-97.
Comparative genomic analysis of fruiting body formation in Myxococcales
Huntley S, Hamann N, Wegener-Feldbrügge S, Treuner-Lange A, Kube M, Reinhardt R, Klages S, Müller R, Ronning CM, Nierman WC, Søgaard-Andersen L
PMID: 21037205
The Journal of infectious diseases. 2011-01-15; 203.2: 168-74.
Deep sequencing reveals mixed infection with 2009 pandemic influenza A (H1N1) virus strains and the emergence of oseltamivir resistance
Ghedin E, Laplante J, Depasse J, Wentworth DE, Santos RP, Lepow ML, Porter J, Stellrecht K, Lin X, Operario D, Griesemer S, Fitch A, Halpin RA, Stockwell TB, Spiro DJ, Holmes EC, St George K
PMID: 21288815
PloS one. 2011-01-14; 6.1: e16016.
The temporal dynamics of differential gene expression in Aspergillus fumigatus interacting with human immature dendritic cells in vitro
Morton CO, Varga JJ, Hornbach A, Mezger M, Sennefelder H, Kneitz S, Kurzai O, Krappmann S, Einsele H, Nierman WC, Rogers TR, Loeffler J
PMID: 21264256
PloS one. 2011-01-10; 6.1: e15950.
Monitoring the long-term molecular epidemiology of the pneumococcus and detection of potential 'vaccine escape' strains
Pandya GA, McEllistrem MC, Venepally P, Holmes MH, Jarrahi B, Sanka R, Liu J, Karamycheva SA, Bai Y, Fleischmann RD, Peterson SN
PMID: 21264340
Nucleic acids research. 2011-01-01; 39.Database issue: D612-9.
AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species
Aurrecoechea C, Barreto A, Brestelli J, Brunk BP, Caler EV, Fischer S, Gajria B, Gao X, Gingle A, Grant G, Harb OS, Heiges M, Iodice J, Kissinger JC, Kraemer ET, Li W, Nayak V, Pennington C, Pinney DF, Pitts B, Roos DS, Srinivasamoorthy G, Stoeckert CJ, Treatman C, Wang H
PMID: 20974635