ɬÀ﷬

Publications

Scientific reports. 2012-01-01; 2.490.
Metagenomes of Mediterranean coastal lagoons
Ghai R, Hernandez CM, Picazo A, Mizuno CM, Ininbergs K, Díez B, Valas R, Dupont CL, McMahon KD, Camacho A, Rodriguez-Valera F
PMID: 22778901
PLoS genetics. 2012-01-01; 8.7: e1002626.
Cell contact-dependent outer membrane exchange in myxobacteria: genetic determinants and mechanism
Pathak DT, Wei X, Bucuvalas A, Haft DH, Gerloff DL, Wall D
PMID: 22511878
PloS one. 2012-01-01; 7.5: e39315.
Evaluation of 16S rDNA-based community profiling for human microbiome research
Ward DV, Gevers D, Giannoukos G, Earl AM, Methé BA, Sodergren E, Feldgarden M, Ciulla DM, Tabbaa D, Arze C, Appelbaum E, Aird L, Anderson S, Ayvaz T, Belter E, Bihan M, Bloom T, Crabtree J, Courtney L, Carmichael L, Dooling D, Erlich RL, Farmer C, Fulton L, Fulton R, Gao H, Gill JA, Haas BJ, Hemphill L, Hall O, Hamilton SG, Hepburn TA, Lennon NJ, Joshi V, Kells C, Kovar CL, Kalra D, Li K, Lewis L, Leonard S, Muzny DM, Mardis E, Mihindukulasuriya K, Magrini V, O'Laughlin M, Pohl C, Qin X, Ross K, Ross MC, Rogers YH, Singh N, Shang Y, Wilczek-Boney K, Wortman JR, Worley KC, Youmans BP, Yooseph S, Zhou Y, Schloss PD, Wilson R, Gibbs RA, Nelson KE, Weinstock G, DeSantis TZ, Petrosino JF, Highlander SK, Birren BW
PMID: 22720093
PloS one. 2012-01-01; 7.5: e32118.
Analyses of the microbial diversity across the human microbiome
Li K, Bihan M, Yooseph S, Methé BA
PMID: 22719823
PLoS computational biology. 2012-01-01; 8.6: e1002358.
Metabolic reconstruction for metagenomic data and its application to the human microbiome
Abubucker S, Segata N, Goll J, Schubert AM, Izard J, Cantarel BL, Rodriguez-Mueller B, Zucker J, Thiagarajan M, Henrissat B, White O, Kelley ST, Methé B, Schloss PD, Gevers D, Mitreva M, Huttenhower C
PMID: 22719234
PloS one. 2012-01-01; 7.6: e29044.
A case study for large-scale human microbiome analysis using ɬÀ﷬'s metagenomics reports (METAREP)
Goll J, Thiagarajan M, Abubucker S, Huttenhower C, Yooseph S, Methé BA
PMID: 22719821
Nucleic acids research. 2012-01-01; 40.Database issue: D306-12.
InterPro in 2011: new developments in the family and domain prediction database
Hunter S, Jones P, Mitchell A, Apweiler R, Attwood TK, Bateman A, Bernard T, Binns D, Bork P, Burge S, de Castro E, Coggill P, Corbett M, Das U, Daugherty L, Duquenne L, Finn RD, Fraser M, Gough J, Haft D, Hulo N, Kahn D, Kelly E, Letunic I, Lonsdale D, Lopez R, Madera M, Maslen J, McAnulla C, McDowall J, McMenamin C, Mi H, Mutowo-Muellenet P, Mulder N, Natale D, Orengo C, Pesseat S, Punta M, Quinn AF, Rivoire C, Sangrador-Vegas A, Selengut JD, Sigrist CJ, Scheremetjew M, Tate J, Thimmajanarthanan M, Thomas PD, Wu CH, Yeats C, Yong SY
PMID: 22096229
Database : the journal of biological databases and curation. 2012-01-01; 2012.bas003.
AntiFam: a tool to help identify spurious ORFs in protein annotation
Eberhardt RY, Haft DH, Punta M, Martin M, O'Donovan C, Bateman A
PMID: 22434837
Methods in molecular biology (Clifton, N.J.). 2012-01-01; 852.11-21.
Oligonucleotide assembly in yeast to produce synthetic DNA fragments
Gibson DG
PMID: 22328422
PloS one. 2012-01-01; 7.5: e29446.
Active and passive immunization protects against lethal, extreme drug resistant-Acinetobacter baumannii infection
Luo G, Lin L, Ibrahim AS, Baquir B, Pantapalangkoor P, Bonomo RA, Doi Y, Adams MD, Russo TA, Spellberg B
PMID: 22253723