Publications
Enterobacterhormaechei subsp. hoffmannii subsp. nov., Enterobacter hormaechei subsp. xiangfangensis comb. nov., Enterobacter roggenkampii sp. nov., and Enterobacter muelleri is a later heterotypic synonym of Enterobacter asburiae based on computational analysis of sequenced Enterobacter genomes
Sutton GG, Brinkac LM, Clarke TH, Fouts DE
PMID:
Abstract
The predominant species in clinical isolates is . Many articles, clinicians, and GenBank submissions misname these strains as . The lack of sequenced type strains or named species/subspecies for some clades in the complex complicate the issue. The genomes of the type strains for 聽subsp.聽 , .聽 subsp.聽 , and , and two strains from Hoffmann clusters III and IV of the complex were sequenced. These genomes, the .聽 聽subsp.聽 type strain, and other available type strains were analysed in conjunction with all extant genomes in NCBI's RefSeq using Average Nucleotide Identity (ANI). There were five recognizable subspecies of : subsp. subsp. nov., subsp. comb. nov., and the three previously known subspecies. One of the strains sequenced from the complex was not a novel subspecies but rather a member of a clade of a novel species: sp. nov.. was determined to be a later heterotypic synonym of which should take precedence. The phylogeny of the genus, particularly the complex, was re-evaluated based on the type strain genome sequences and all other available genomes in RefSeq.
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